1. The experimentally verified PTM sites file

PTM Type

Extracellular

Cytoplasmic

Transmembrane

Other

Experimental TM protein
Potential TM protein

All

Phosphoserine

Phosphothreonine

Phosphotyrosine

N-linked (GlcNAc...)

-
-

N6-acetyllysine

S-nitrosocysteine

N-linked (Glc...)

-

O-linked (GalNAc...)

-
-

S-cysteinyl 3-(oxidosulfanyl)alanine (Cys-Cys)

-
-

S-palmitoyl cysteine

-

N-acetylalanine

-
-

N-palmitoyl cysteine

-
-

N-myristoyl glycine

-
-

O-linked (GlcNAc)

-
-

N-acetylserine

-
-

N-acetylmethionine

S-farnesyl cysteine

-
-
-
-
-

Caspase cleavage aspartic acid

-
-
-

Methionine sulfone

-
-
-

N2,N2-dimethylarginine

-

N6-(retinylidene)lysine

-
-
-

5-methylarginine

-

DePhosphotyrosine

-
-
-

S-geranylgeranyl cysteine

-
-
-
-

O-linked (GlcNAc...)

-
-
-

Cysteine methyl ester

-
-
-
-

4-hydroxyproline

-
-
-

O-linked (Man)

-
-
-

Asymmetric dimethylarginine

-
-
-
-
-

Pyrrolidone carboxylic acid

-
-

S-diacylglycerol cysteine

-
-
-
-

N-acetylthreonine

-
-
-
-

Sulfotyrosine

-
-
-

N-formylmethionine

-

DePhosphoserine

-
-
-

N6,N6-dimethyllysine

-
-
-
-
-

Glutamate methyl ester (Glu)

-
-
-

Nitrated

-
-

Omega-N-methylarginine

-
-
-
-

Deamidated asparagine

-
-
-

O-linked (Man...)

-
-
-
-
-

N4-methylasparagine

-
-
-
-
-

(3S)-3-hydroxyasparagine

-
-
-
-
-

GPI-anchor amidated serine

-
-
-

N6-methyllysine

-
-
-

Omega-N-methylated arginine

-
-
-

Glutamate methyl ester (Gln)

-
-
-

N6-succinyllysine

-
-
-
-
-

N-linked (Glc)

-
-
-
-
-

C-linked (Man)

-
-
-

Phosphohistidine

-
-
-

Citrulline

-
-
-
-
-

Deamidated glutamine

-
-
-
-
-

Nitrated tyrosine

-
-
-

O-linked (Xyl...)

-
-
-

O-linked (Xyl...) (glycosaminoglycan)

-
-
-

N-acetylglycine

-
-
-
-
-

 

  2. Topology information file
All
Helical domain protein
Beta stranded domain protein
Virion
Nuclear
Mitochondrial
Chloroplast
Exoplasmic loop
Forespore
Lumenal
Intragranular
Intravacuolar
Vacuolar
Vesicular
Periplasmic(Bacteria)
Peroxisome